Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810579.1_cds_XP_016496269.1_10509
CDS Infomation

[gene=LOC107815231] [db_xref=GeneID:107815231] [protein=protein FAR-RED IMPAIRED RESPONSE 1-like isoform X2] [protein_id=XP_016496269.1] [location=join(17278..19395,19488..19544,19793..19861,19997..20059,20143..20211,20298..20342,20423..20479)] [gbkey=CDS]
Sequence

ATGGTTGATCATGGAGTTGTCGTGCAAAGTAGTCTTCAAGTGATTGGTGATATGGTTGAT
GCAGTAGACAACACATGTCACAATAGGGATGGTGGAGTTGCCACTTCTCCTAAGAGAAGC
ATTGCCGGAGTAGAAGGAAATGCAGATTTGGAGCCACGTGATGGGATTGAATTTGAGTCC
CACGAGGCTGCGTATGCATTCTACCAAGAATATGCCAAGTCCATGGGATTCACTACCTCG
ATTAAGAACAGCCGTCGCTCAAAGAAATCAAAAGAATTCATTGATGCTAAATTTGCATGT
TCTAGATATGGTGCGACTCCGGAATCAGATGCTGGCACTAGTAGACGTCCTAGCGTCAAA
AAGACCAATTGCAAAGCAAGCATGCATGTTAAGAGAAAGCGAGATGGAAAATGGTATATC
CATGAGTTTATAAAGGATCATAATCATGAGCTTTTACCAGCCTTGGCTTATCATTTCCGT
ATTCACAGGAATGTTAAACTTGCTGAGAAAAATAACATTGATATTCTTCATGCTGTTAGT
GAACGAACAAGAAAGATGTATGTTGAGATGTCTAGACAATGTGGTGGAAGTCAAGAAGTT
GGCCTGCTAACTAACGATTTAAATTACCAGTTAGATAGAGGCAGGTGCTTGTCATTAGAA
GAGGGAGATGCACAAGTTATGCTCGAGTATTTCATGCATATCCAGAGAGAGAACCCATAC
TTCTTTTATGCGATTGATCTCAATGAAGATCAACGCTTAAGGAACTTGTTCTGGATTGAT
GCCAAAAGTAGGAAAGACTATGTCAGCTTTAGTGATGTGGTTTTCTTTGATACCAGCTAT
ACGAAAAGCAATGAGAAGATGCCGTTTGTTCTTTTTGTTGGGGTAAACCATCATTGTCAA
CCTATGTTGCTTGGATGTGCACTTGTAGCAGATGAGACCAAACCAACATTTGTGTGGTTG
ATGAAGACGTGGCTTAGGGCAGTAGGTGGGCAGGCTCCGAAGGTGATGATCACTGATCAA
GATAAGTCACTCAAAGCAGCTATTGAAGAAGTTTTCCCGTGTTCACGTCATTGCTTTGCG
CTTTGGCATGTGCTTGAAAGAATTCCGGATATTCTTGCTCATGTCATAAAGCAGCATGAG
AATTTCATGGAAAAATTCAGCAAATGTATATTTAATTCAGTAACTGATGAACAATTTGAT
TTAAGATGGTGGAAGATGGTCAGCAGATTCGAACTGCAAGAGAATGAATGGATTCATACC
CTGTATGAGGAGCGCAGAAAGTGGGTTCCAGCTTACATGAGAGGCAGTTTTTTTGCTGGA
ATGTCAACAGCTCAACGATCAGAGAGTATAAGCTCCTTCTTTGATAAGTACATTCATAAG
AAAATTAGTCTCAAAGAGTTTATGAGACAATATGGAATGATTCTGCAAAATAGATATGAA
GAGGAAGCAGTAGCAGACTTTGAGATATTGCAGAAACATCCTGCTTTAAAATCACCTTCA
CCTTGGGAAAAGCAGATGTCAACAATTTATACACATGCTATATTTAGGAAATTTCAAGTT
GAAGTGTTGGGTGTAGTTGGGTGCCATCCAAAGAAGGAAGCTGAAAATGGGGAAACTGTA
ACTTTTAGAGTTAATGACTGCGAGAAAAATGAAAATTTTATGGTCATGTGGAATGAGGCA
AAATCAGATGTTTCTTGTTCGTGCCTTCTATTTGAATACAAAGGTTTCCTTTGTAGGCAT
GCAATGAATGTTCTTCAGATCTGTGGTCTTCCAAGCATCCCATCTCAATATATTTTGAAG
AGGTGGACCAAAGATGCAAAGAATAGACAGTTGTTGCTTGAGGAGACCGAAAGAATAACC
AGGGTGCAAAGATACAATGATCTATGTAGAAGGGCTATTGAACTGGGTGAGGAGGGTTCC
TTATCTGAGGAGAGTTACGGTATTGCCTTCCGTGTCCTAGATGAAGCTCTAAAGGACTGT
GTGAATGTTAACAATAAAAGTTCTACTTTAACAGAATGTAGCAGCAGTTCTATTGGACTT
CGTGATCTTGAACAAGATACTCAAGGGATTCATGCTACCAAAACAAGTAGGAAGAAAAAT
ACAAACAAGAAACGGAAGGTGCACACTGAACCAGAAGCTGCAATAGTTGAAGCACAAGAT
AGCTTGCAGCAGATGGGTAATCTTAGTGTGGGTGGAATGACATTGAATGGCTATTATGGC
ACACAGCAGAATGTGCAGGGACTGTTGAATTTGATGGAACCTCCCCATGATGGCTATTAT
GTTAACCAACAGAATATGCAGGGACTGGGACAACTCAATACAATTGCACCTGGCCATGAT
GGGTTTTTCGGGTCTCAACAAAGCATTCCTGGACTAGGGCATCTGGATTTTAGGCAGCCA
AGTTTCACATATGGTCTGCAGGATGAGCCTAGTCTAAGAGCTTCTCAGCTGCATGGTAAC
AGTGCTAGACATGCATGA

Peptide Sequence

PEP ID

XP_016496269.1
PEP Infomation

PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like isoform X2 [Nicotiana tabacum]
Sequence

MVDHGVVVQSSLQVIGDMVDAVDNTCHNRDGGVATSPKRSIAGVEGNADLEPRDGIEFES
HEAAYAFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGATPESDAGTSRRPSVK
KTNCKASMHVKRKRDGKWYIHEFIKDHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVS
ERTRKMYVEMSRQCGGSQEVGLLTNDLNYQLDRGRCLSLEEGDAQVMLEYFMHIQRENPY
FFYAIDLNEDQRLRNLFWIDAKSRKDYVSFSDVVFFDTSYTKSNEKMPFVLFVGVNHHCQ
PMLLGCALVADETKPTFVWLMKTWLRAVGGQAPKVMITDQDKSLKAAIEEVFPCSRHCFA
LWHVLERIPDILAHVIKQHENFMEKFSKCIFNSVTDEQFDLRWWKMVSRFELQENEWIHT
LYEERRKWVPAYMRGSFFAGMSTAQRSESISSFFDKYIHKKISLKEFMRQYGMILQNRYE
EEAVADFEILQKHPALKSPSPWEKQMSTIYTHAIFRKFQVEVLGVVGCHPKKEAENGETV
TFRVNDCEKNENFMVMWNEAKSDVSCSCLLFEYKGFLCRHAMNVLQICGLPSIPSQYILK
RWTKDAKNRQLLLEETERITRVQRYNDLCRRAIELGEEGSLSEESYGIAFRVLDEALKDC
VNVNNKSSTLTECSSSSIGLRDLEQDTQGIHATKTSRKKNTNKKRKVHTEPEAAIVEAQD
SLQQMGNLSVGGMTLNGYYGTQQNVQGLLNLMEPPHDGYYVNQQNMQGLGQLNTIAPGHD
GFFGSQQSIPGLGHLDFRQPSFTYGLQDEPSLRASQLHGNSARHA

Transcript Sequence

Gene sequence data has not been registered.